biology — a reasoning module

Metabolic networks and pedigrees reasoned over as a biologist reads them, as a DKE Python module you compile into your own store. You record a network's reactions and its medium, or a family's members and its mode of inheritance; it names what the network can make, which one compound would let it make one more, every person's ancestors, the carriers the mode requires and each member it cannot explain, withdrawing each answer when you correct the fact it rests on. It translates genes in two genetic codes, crosses genotypes, tests counts by chi-square, and calculates logistic growth, predator and prey, genetic drift and rings of repressing genes.

Licence: MIT. Current version: 1.0.2, released in rev 145.

Get it

The whole release, as one archive:

curl -O https://dke.langsyn.com/source/biology/1.0.2/biology-1.0.2.tar.gz

Its SHA-256: 7e87afa06ac646ad168fbc980200a7fb9aea2e665a58b27d2c3332d4c538386b.

Or browse version 1.0.2 file by file. /source/biology/latest/ always redirects to the current version. A release's files never change. When the next release supersedes this one, this version stays served at its URL, marked superseded, so cite the version and the archive's digest to say exactly which bytes you read, and use latest for a link that follows each new release.

Current release